PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT31937
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 429aa    MW: 44995.1 Da    PI: 6.6285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT31937genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.39.9e-31184243159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dg++WrKYGqK+ kg+++pr+YYrCt a  Cpv+k+v+r++ed +++++tYeg+Hnh+
  EMT31937 184 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApACPVRKQVQRCQEDMSILITTYEGTHNHP 243
               58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.4E-32169245IPR003657WRKY domain
SuperFamilySSF1182904.32E-27177245IPR003657WRKY domain
PROSITE profilePS5081128.162179245IPR003657WRKY domain
SMARTSM007744.7E-37184244IPR003657WRKY domain
PfamPF031066.0E-27185243IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006826Biological Processiron ion transport
GO:0010043Biological Processresponse to zinc ion
GO:0010106Biological Processcellular response to iron ion starvation
GO:0010167Biological Processresponse to nitrate
GO:0015706Biological Processnitrate transport
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MAQDELSTMQ EEMEKMKEEN KMLRRVVDRT VRDYYELQTK LAAYQKQPAD QEPKETEVFL  60
SLGGTAPAAA VAEAKSKEEQ AALRPSVGSD DTDDGREGLG LSLSLRTSSY EDEARRDVVD  120
GGAPDIVSDV GKARGYALLE SSRMSPPASG DLAAAGGIGS QQGVNAANRK TRVSVRVRCQ  180
GPTMNDGCQW RKYGQKVAKG NPCPRAYYRC TVAPACPVRK QVQRCQEDMS ILITTYEGTH  240
NHPLPVGATA MASTATAGAG AATFTLLSST SSDAAVSGGP PPASSSYLSP YLQLNSSSQY  300
HSSASPLMSG NMGGGGAQHL SMFGHSSALA SQPATLLKYP WPPNPSHGGA AGLGGGKRPF  360
WGTGGVDDVR PTPLPDNAGT MASDPNQFSA AIATAISNVI GKDGQATRSK EGESSNKWGV  420
VVESLPPHE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21171247176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3632470.0AK363247.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013L09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701133.11e-151PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 61
TrEMBLM8CW920.0M8CW92_AEGTA; Putative WRKY transcription factor 9
TrEMBLW5GYP70.0W5GYP7_WHEAT; Uncharacterized protein
STRINGMLOC_71463.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80223446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.11e-49WRKY DNA-binding protein 9